Steric constraint in the primary photoproduct of an archaeal rhodopsin from regiospecific perturbation of C-D stretching vibration of the retinyl chromophore

Yuki Sudo, Yuji Furutani, Akimori Wada, Masayoshi Ito, Naoki Kamo, Hideki Kandori

Research output: Contribution to journalArticle

33 Citations (Scopus)

Abstract

In visual and archaeal rhodopsins, light energy is stored in the chromophore-protein interaction after retinal photoisomerization. This paper reports a novel method to monitor the steric constraint after retinal isomerization by use of enhanced C-D stretching vibrations. In the difference FTIR spectra between an archaeal light-sensor pharaonis phoborhodopsin (ppR) and the primary K intermediate at 77 K, no peaks were observed in the 2160-2330 cm-1 region for deuterated retinals at position 7, 8, 10, 11, 12, and 15, whereas a strong peak appeared at 2244 cm-1 for the K intermediate of ppR possessing a C14-D-labeled retinal. The 2244-cm-1 band is assigned as the C14-D stretching vibration, and enhanced absorption in the K state probably originates from the local steric constraint at the C14-D position (also possible electrostatic field effects) after the C13=C14 double bond rotation.

Original languageEnglish
Pages (from-to)16036-16037
Number of pages2
JournalJournal of the American Chemical Society
Volume127
Issue number46
DOIs
Publication statusPublished - Nov 23 2005
Externally publishedYes

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Microbial Rhodopsins
Chromophores
Vibration
Stretching
Light
Photoisomerization
Fourier Transform Infrared Spectroscopy
Isomerization
Static Electricity
Electric fields
Proteins
Sensors

ASJC Scopus subject areas

  • Chemistry(all)

Cite this

Steric constraint in the primary photoproduct of an archaeal rhodopsin from regiospecific perturbation of C-D stretching vibration of the retinyl chromophore. / Sudo, Yuki; Furutani, Yuji; Wada, Akimori; Ito, Masayoshi; Kamo, Naoki; Kandori, Hideki.

In: Journal of the American Chemical Society, Vol. 127, No. 46, 23.11.2005, p. 16036-16037.

Research output: Contribution to journalArticle

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AU - Kamo, Naoki

AU - Kandori, Hideki

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