Plant viruses and viroids in Japan

Shin ichi Fuji; Tomofumi Mochizuki; Mitsuru Okuda; Shinya Tsuda; Satoshi Kagiwada; Ken Taro Sekine; Masashi Ugaki; Keiko T. Natsuaki; Masamichi Isogai; Tetsuo Maoka; Minoru Takeshita; Nobuyuki Yoshikawa; Kazuyuki Mise; Takahide Sasaya; Hideki Kondo; Kenji Kubota; Yasuyuki Yamaji; Toru Iwanami; Kazusato Ohshima; Kappei Kobayashi; Tatsuji Hataya; Teruo Sano; Nobuhiro Suzuki

doi:10.1007/s10327-022-01051-y

Plant viruses and viroids in Japan

Shin ichi Fuji, Tomofumi Mochizuki, Mitsuru Okuda, Shinya Tsuda, Satoshi Kagiwada, Ken Taro Sekine, Masashi Ugaki, Keiko T. Natsuaki, Masamichi Isogai, Tetsuo Maoka, Minoru Takeshita, Nobuyuki Yoshikawa, Kazuyuki Mise, Takahide Sasaya, Hideki Kondo, Kenji Kubota, Yasuyuki Yamaji, Toru Iwanami, Kazusato Ohshima, Kappei KobayashiTatsuji Hataya, Teruo Sano, Nobuhiro Suzuki

Institute of Plant Science and Resources

Research output: Contribution to journal › Review article › peer-review

Abstract

An increasing number of plant viruses and viroids have been reported from all over the world due largely to metavirogenomics approaches with technological innovation. Herein, the official changes of virus taxonomy, including the establishment of megataxonomy and amendments of the codes of virus classification and nomenclature, recently made by the International Committee on Taxonomy of Viruses were summarized. The continued efforts of the plant virology community of Japan to index all plant viruses and viroids occurring in Japan, which represent 407 viruses, including 303 virus species and 104 unclassified viruses, and 25 viroids, including 20 species and 5 unclassified viroids, as of October 2021, were also introduced. These viruses and viroids are collectively classified into 81 genera within 26 families of 3 kingdoms (Shotokuvirae, Orthornavirae, Pararnavirae) across 2 realms (Monodnaviria and Riboviria). This review also overviewed how Japan’s plant virus/viroid studies have contributed to advance virus/viroid taxonomy.

Original language	English
Pages (from-to)	105-127
Number of pages	23
Journal	Journal of General Plant Pathology
Volume	88
Issue number	2
DOIs	https://doi.org/10.1007/s10327-022-01051-y
Publication status	Published - Mar 2022

Keywords

DNA virus
Plant quarantine
Plant virus
RNA virus
Viroid
Virus taxonomy

ASJC Scopus subject areas

Agronomy and Crop Science
Plant Science

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10.1007/s10327-022-01051-y

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Fuji, S. I., Mochizuki, T., Okuda, M., Tsuda, S., Kagiwada, S., Sekine, K. T., Ugaki, M., Natsuaki, K. T., Isogai, M., Maoka, T., Takeshita, M., Yoshikawa, N., Mise, K., Sasaya, T., Kondo, H., Kubota, K., Yamaji, Y., Iwanami, T., Ohshima, K., ... Suzuki, N. (2022). Plant viruses and viroids in Japan. Journal of General Plant Pathology, 88(2), 105-127. https://doi.org/10.1007/s10327-022-01051-y

Plant viruses and viroids in Japan. / Fuji, Shin ichi; Mochizuki, Tomofumi; Okuda, Mitsuru; Tsuda, Shinya; Kagiwada, Satoshi; Sekine, Ken Taro; Ugaki, Masashi; Natsuaki, Keiko T.; Isogai, Masamichi; Maoka, Tetsuo; Takeshita, Minoru; Yoshikawa, Nobuyuki; Mise, Kazuyuki; Sasaya, Takahide; Kondo, Hideki; Kubota, Kenji; Yamaji, Yasuyuki; Iwanami, Toru; Ohshima, Kazusato; Kobayashi, Kappei; Hataya, Tatsuji; Sano, Teruo; Suzuki, Nobuhiro.

In: Journal of General Plant Pathology, Vol. 88, No. 2, 03.2022, p. 105-127.

Research output: Contribution to journal › Review article › peer-review

Fuji, SI, Mochizuki, T, Okuda, M, Tsuda, S, Kagiwada, S, Sekine, KT, Ugaki, M, Natsuaki, KT, Isogai, M, Maoka, T, Takeshita, M, Yoshikawa, N, Mise, K, Sasaya, T, Kondo, H, Kubota, K, Yamaji, Y, Iwanami, T, Ohshima, K, Kobayashi, K, Hataya, T, Sano, T & Suzuki, N 2022, 'Plant viruses and viroids in Japan', Journal of General Plant Pathology, vol. 88, no. 2, pp. 105-127. https://doi.org/10.1007/s10327-022-01051-y

Fuji, Shin ichi ; Mochizuki, Tomofumi ; Okuda, Mitsuru ; Tsuda, Shinya ; Kagiwada, Satoshi ; Sekine, Ken Taro ; Ugaki, Masashi ; Natsuaki, Keiko T. ; Isogai, Masamichi ; Maoka, Tetsuo ; Takeshita, Minoru ; Yoshikawa, Nobuyuki ; Mise, Kazuyuki ; Sasaya, Takahide ; Kondo, Hideki ; Kubota, Kenji ; Yamaji, Yasuyuki ; Iwanami, Toru ; Ohshima, Kazusato ; Kobayashi, Kappei ; Hataya, Tatsuji ; Sano, Teruo ; Suzuki, Nobuhiro. / Plant viruses and viroids in Japan. In: Journal of General Plant Pathology. 2022 ; Vol. 88, No. 2. pp. 105-127.

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abstract = "An increasing number of plant viruses and viroids have been reported from all over the world due largely to metavirogenomics approaches with technological innovation. Herein, the official changes of virus taxonomy, including the establishment of megataxonomy and amendments of the codes of virus classification and nomenclature, recently made by the International Committee on Taxonomy of Viruses were summarized. The continued efforts of the plant virology community of Japan to index all plant viruses and viroids occurring in Japan, which represent 407 viruses, including 303 virus species and 104 unclassified viruses, and 25 viroids, including 20 species and 5 unclassified viroids, as of October 2021, were also introduced. These viruses and viroids are collectively classified into 81 genera within 26 families of 3 kingdoms (Shotokuvirae, Orthornavirae, Pararnavirae) across 2 realms (Monodnaviria and Riboviria). This review also overviewed how Japan{\textquoteright}s plant virus/viroid studies have contributed to advance virus/viroid taxonomy.",

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AU - Sekine, Ken Taro

AU - Ugaki, Masashi

AU - Natsuaki, Keiko T.

AU - Isogai, Masamichi

AU - Maoka, Tetsuo

AU - Takeshita, Minoru

AU - Yoshikawa, Nobuyuki

AU - Mise, Kazuyuki

AU - Sasaya, Takahide

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AU - Kubota, Kenji

AU - Yamaji, Yasuyuki

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AU - Kobayashi, Kappei

AU - Hataya, Tatsuji

AU - Sano, Teruo

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Plant viruses and viroids in Japan

Abstract

Keywords

ASJC Scopus subject areas

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