Pandoraea oxalativorans sp. nov., Pandoraea faecigallinarum sp. nov. and Pandoraea vervacti sp. nov., isolated from oxalate-enriched culture

Nurettin Sahin, Akio Tani, Recep Kotan, Ivo Sedláček, Kazuhide Kimbara, Abdurrahman U. Tamer

Research output: Contribution to journalArticle

23 Citations (Scopus)

Abstract

Five isolates, designated TA2, TA4, TA25 T KOx T and NS15 T were isolated in previous studies by enrichment in mineral medium with potassium oxalate as the sole carbon source and were characterized using a polyphasic approach. The isolates were Gram-reaction-negative, aerobic, non-spore-forming rods. Phylogenetic analyses based on 16S rRNA and DNA gyrase B subunit (gyrB) gene sequences confirmed that the isolates belonged to the genus Pandoraea and were most closely related to Pandoraea sputorum and Pandoraea pnomenusa (97.2-99.7% 16S rRNA gene sequence similarity). The isolates could be differentiated from their closest relatives on the basis of several phenotypic characteristics. The major cellular fatty acid profiles of the isolates comprised C 16: 0, C 18: 1 ω 7c, C17: 0 cyclo and summed feature 3 (C 16: 1ω7c and/or iso-C15: 0 2-OH). On the basis of DNA-DNA hybridization studies and phylogenetic analyses, the isolates represent three novel species within the genus Pandoraea, for which the names Pandoraea oxalativorans sp. nov. (TA25 T 5NBRC 106091 T 5CCM 7677 T 5DSM 23570 T), Pandoraea faecigallinarum sp. nov. (KOx T 5NBRC 106092 T 5CCM 2766 T 5DSM 23572 T) and Pandoraea vervacti sp. nov. (NS15 T 5NBRC 106088 T 5CCM 7667 T 5DSM 23571) are proposed.

Original languageEnglish
Pages (from-to)2247-2253
Number of pages7
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume61
Issue number9
DOIs
Publication statusPublished - Sep 2011

Fingerprint

Pandoraea
Oxalates
oxalates
oxalate
DNA Gyrase
DNA
Oxalic Acid
new species
rRNA Genes
Names
phylogenetics
Minerals
Pandoraea sputorum
Fatty Acids
Carbon
Pandoraea pnomenusa
gene
ribosomal RNA
fatty acid
DNA topoisomerase (ATP-hydrolysing)

ASJC Scopus subject areas

  • Microbiology
  • Ecology, Evolution, Behavior and Systematics

Cite this

Pandoraea oxalativorans sp. nov., Pandoraea faecigallinarum sp. nov. and Pandoraea vervacti sp. nov., isolated from oxalate-enriched culture. / Sahin, Nurettin; Tani, Akio; Kotan, Recep; Sedláček, Ivo; Kimbara, Kazuhide; Tamer, Abdurrahman U.

In: International Journal of Systematic and Evolutionary Microbiology, Vol. 61, No. 9, 09.2011, p. 2247-2253.

Research output: Contribution to journalArticle

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