Historical Relationships among Wild Boar Populations of the Ryukyu Archipelago and Other Eurasian regions, as Inferred from Mitochondrial Cytochrome b Gene Sequences

Saka Yoshikawa, Makiko Mimura, Shin Watanabe, Liang Kong Lin, Hidetoshi Ota, Yasushi Mizoguchi

Research output: Contribution to journalArticle

3 Citations (Scopus)

Abstract

The Ryukyu wild boar (Sus scrofa riukiuanus) is an endemic, morphologically defined subspecies of the Eurasian wild boar (S. scrofa) found on five islands of the Ryukyu Archipelago (a group of small islands stretching from mainland Japan to Taiwan). Two hypothetical scenarios have been proposed regarding the origin of the current Ryukyu wild boar populations: 1) natural dispersal and 2) transportation and subsequent release by prehistoric humans. To test these two hypotheses, we compared the mitochondrial cytochrome b gene sequence (1140 base pairs) in 352 individual wild boar samples that included representatives of all five insular populations of the Ryukyu wild boar and populations of other conspecific subspecies in insular East and Southeast Asia and the Eurasian Continent. A total of 68 haplotypes were recognized, of which 12 were unique to the Ryukyu wild boar populations. The results of Bayesian phylogenetic analyses supported monophyly of the five Ryukyu populations (posterior probability value of 92), confirming the validity of the subspecies as a natural group. Coalescent analysis estimated the divergence times between the Ryukyu wild boar and the other conspecific subspecies as 144-465 thousand years ago (Kya), with a 95% HPD (highest posterior density) range of 51-837 Kya, and with no significant migration. Taking the broadly accepted date of initial human migration to the Ryukyus (no earlier than 50 Kya) into consideration, our results strongly suggest that the ancestral form of the Ryukyu wild boar first entered the Ryukyu Archipelago by natural dispersal prior to the arrival of prehistoric humans.

Original languageEnglish
Pages (from-to)520-526
Number of pages7
JournalZoological science
Volume33
Issue number5
DOIs
Publication statusPublished - Oct 2016
Externally publishedYes

Fingerprint

Ryukyu Archipelago
wild boars
cytochrome b
nucleotide sequences
Sus scrofa
East Asia
South East Asia
monophyly
Taiwan
haplotypes
Japan
phylogeny

Keywords

  • coalescent analysis
  • divergence time
  • migration
  • phylogenetic analysis
  • Ryukyu wild boar

ASJC Scopus subject areas

  • Animal Science and Zoology

Cite this

Historical Relationships among Wild Boar Populations of the Ryukyu Archipelago and Other Eurasian regions, as Inferred from Mitochondrial Cytochrome b Gene Sequences. / Yoshikawa, Saka; Mimura, Makiko; Watanabe, Shin; Lin, Liang Kong; Ota, Hidetoshi; Mizoguchi, Yasushi.

In: Zoological science, Vol. 33, No. 5, 10.2016, p. 520-526.

Research output: Contribution to journalArticle

Yoshikawa, Saka ; Mimura, Makiko ; Watanabe, Shin ; Lin, Liang Kong ; Ota, Hidetoshi ; Mizoguchi, Yasushi. / Historical Relationships among Wild Boar Populations of the Ryukyu Archipelago and Other Eurasian regions, as Inferred from Mitochondrial Cytochrome b Gene Sequences. In: Zoological science. 2016 ; Vol. 33, No. 5. pp. 520-526.
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