Genetic diversity of beet necrotic yellow vein virus

Tetsuo Tamada, Hideki Kondo, Sotaro Chiba

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Abstract

Beet necrotic yellow vein virus (BNYVV) is a member of the genus Benyvirus in the family Benyviridae with multipartite positive-sense single-stranded RNA genomes encapsidated in rigid rod-shaped particles. The members of Benyvirus including four species are similar to those of the family Virgaviridae, in respect of viral particle assembly, movement, and plasmodiophorid transmissibility. Recent studies revealed that ancestors and/or relatives of benyviruses may have infected a wide range of hosts such as plants, insects, algae, and fungi. For phylogenetic analyses of BNYVV genes, worldwide BNYVV isolates form four clades, A-I, A-II, A-III, and B, from which at least ten subgroup isolates (strains) have derived. These original BNYVV types and their progeny strains might have existed in East Asia, and each source had introduced infection to cultivated sugar beet plants and might have spread worldwide only in the last half century. Along with the growth of resistant varieties in rhizomania-infested areas since the 1980s, strong selection pressure has been imposed on the RNA3-encoded p25 gene, and, consequently, resistance-breaking variants that have single amino acid changes in the p25 protein have been generated. RNA5-encoded p26 gene is also associated with resistance breaking as well as symptom severity in sugar beet roots.

Original languageEnglish
Title of host publicationRhizomania
PublisherSpringer International Publishing
Pages109-131
Number of pages23
ISBN (Electronic)9783319306780
ISBN (Print)9783319306766
DOIs
Publication statusPublished - Jan 1 2016

Fingerprint

Beet necrotic yellow vein virus
Benyvirus
Beta vulgaris
Veins
Viruses
genetic variation
Virgaviridae
algae
sugar beet
genes
Plasmodiophorida
East Asia
virion
host range
signs and symptoms (plants)
Genes
Virus Assembly
ancestry
Far East
Host Specificity

Keywords

  • Benyvirus
  • BNYVV
  • Evolution
  • Nucleotide diversity
  • Plasmodiophorids
  • Resistance breaking
  • Rhizomania
  • Sugar beet
  • Virgaviridae

ASJC Scopus subject areas

  • Agricultural and Biological Sciences(all)

Cite this

Tamada, T., Kondo, H., & Chiba, S. (2016). Genetic diversity of beet necrotic yellow vein virus. In Rhizomania (pp. 109-131). Springer International Publishing. https://doi.org/10.1007/978-3-319-30678-0_5

Genetic diversity of beet necrotic yellow vein virus. / Tamada, Tetsuo; Kondo, Hideki; Chiba, Sotaro.

Rhizomania. Springer International Publishing, 2016. p. 109-131.

Research output: Chapter in Book/Report/Conference proceedingChapter

Tamada, T, Kondo, H & Chiba, S 2016, Genetic diversity of beet necrotic yellow vein virus. in Rhizomania. Springer International Publishing, pp. 109-131. https://doi.org/10.1007/978-3-319-30678-0_5
Tamada T, Kondo H, Chiba S. Genetic diversity of beet necrotic yellow vein virus. In Rhizomania. Springer International Publishing. 2016. p. 109-131 https://doi.org/10.1007/978-3-319-30678-0_5
Tamada, Tetsuo ; Kondo, Hideki ; Chiba, Sotaro. / Genetic diversity of beet necrotic yellow vein virus. Rhizomania. Springer International Publishing, 2016. pp. 109-131
@inbook{631bb66ed88f44968b397221be4b40a5,
title = "Genetic diversity of beet necrotic yellow vein virus",
abstract = "Beet necrotic yellow vein virus (BNYVV) is a member of the genus Benyvirus in the family Benyviridae with multipartite positive-sense single-stranded RNA genomes encapsidated in rigid rod-shaped particles. The members of Benyvirus including four species are similar to those of the family Virgaviridae, in respect of viral particle assembly, movement, and plasmodiophorid transmissibility. Recent studies revealed that ancestors and/or relatives of benyviruses may have infected a wide range of hosts such as plants, insects, algae, and fungi. For phylogenetic analyses of BNYVV genes, worldwide BNYVV isolates form four clades, A-I, A-II, A-III, and B, from which at least ten subgroup isolates (strains) have derived. These original BNYVV types and their progeny strains might have existed in East Asia, and each source had introduced infection to cultivated sugar beet plants and might have spread worldwide only in the last half century. Along with the growth of resistant varieties in rhizomania-infested areas since the 1980s, strong selection pressure has been imposed on the RNA3-encoded p25 gene, and, consequently, resistance-breaking variants that have single amino acid changes in the p25 protein have been generated. RNA5-encoded p26 gene is also associated with resistance breaking as well as symptom severity in sugar beet roots.",
keywords = "Benyvirus, BNYVV, Evolution, Nucleotide diversity, Plasmodiophorids, Resistance breaking, Rhizomania, Sugar beet, Virgaviridae",
author = "Tetsuo Tamada and Hideki Kondo and Sotaro Chiba",
year = "2016",
month = "1",
day = "1",
doi = "10.1007/978-3-319-30678-0_5",
language = "English",
isbn = "9783319306766",
pages = "109--131",
booktitle = "Rhizomania",
publisher = "Springer International Publishing",

}

TY - CHAP

T1 - Genetic diversity of beet necrotic yellow vein virus

AU - Tamada, Tetsuo

AU - Kondo, Hideki

AU - Chiba, Sotaro

PY - 2016/1/1

Y1 - 2016/1/1

N2 - Beet necrotic yellow vein virus (BNYVV) is a member of the genus Benyvirus in the family Benyviridae with multipartite positive-sense single-stranded RNA genomes encapsidated in rigid rod-shaped particles. The members of Benyvirus including four species are similar to those of the family Virgaviridae, in respect of viral particle assembly, movement, and plasmodiophorid transmissibility. Recent studies revealed that ancestors and/or relatives of benyviruses may have infected a wide range of hosts such as plants, insects, algae, and fungi. For phylogenetic analyses of BNYVV genes, worldwide BNYVV isolates form four clades, A-I, A-II, A-III, and B, from which at least ten subgroup isolates (strains) have derived. These original BNYVV types and their progeny strains might have existed in East Asia, and each source had introduced infection to cultivated sugar beet plants and might have spread worldwide only in the last half century. Along with the growth of resistant varieties in rhizomania-infested areas since the 1980s, strong selection pressure has been imposed on the RNA3-encoded p25 gene, and, consequently, resistance-breaking variants that have single amino acid changes in the p25 protein have been generated. RNA5-encoded p26 gene is also associated with resistance breaking as well as symptom severity in sugar beet roots.

AB - Beet necrotic yellow vein virus (BNYVV) is a member of the genus Benyvirus in the family Benyviridae with multipartite positive-sense single-stranded RNA genomes encapsidated in rigid rod-shaped particles. The members of Benyvirus including four species are similar to those of the family Virgaviridae, in respect of viral particle assembly, movement, and plasmodiophorid transmissibility. Recent studies revealed that ancestors and/or relatives of benyviruses may have infected a wide range of hosts such as plants, insects, algae, and fungi. For phylogenetic analyses of BNYVV genes, worldwide BNYVV isolates form four clades, A-I, A-II, A-III, and B, from which at least ten subgroup isolates (strains) have derived. These original BNYVV types and their progeny strains might have existed in East Asia, and each source had introduced infection to cultivated sugar beet plants and might have spread worldwide only in the last half century. Along with the growth of resistant varieties in rhizomania-infested areas since the 1980s, strong selection pressure has been imposed on the RNA3-encoded p25 gene, and, consequently, resistance-breaking variants that have single amino acid changes in the p25 protein have been generated. RNA5-encoded p26 gene is also associated with resistance breaking as well as symptom severity in sugar beet roots.

KW - Benyvirus

KW - BNYVV

KW - Evolution

KW - Nucleotide diversity

KW - Plasmodiophorids

KW - Resistance breaking

KW - Rhizomania

KW - Sugar beet

KW - Virgaviridae

UR - http://www.scopus.com/inward/record.url?scp=85017045084&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85017045084&partnerID=8YFLogxK

U2 - 10.1007/978-3-319-30678-0_5

DO - 10.1007/978-3-319-30678-0_5

M3 - Chapter

AN - SCOPUS:85017045084

SN - 9783319306766

SP - 109

EP - 131

BT - Rhizomania

PB - Springer International Publishing

ER -