Genetic and molecular analyses of the interaction between the flagellum-specific sigma and anti-sigma factors in Salmonella typhimurium

Kazuhiro Kutsukake, Sunao Iyoda, Kouhei Ohnishi, Tetsuo Iino

Research output: Contribution to journalArticle

63 Citations (Scopus)


More than 50 genes are required for flagellar formation and function in Salmonella Typhimurium. According to the cascade model of flagellar regulon, the flagellar operons are divided into three classes, 1, 2, and 3, with respect to transcriptional hierarchy. FliA is an alternative sigma factor specific for transcription of the class 3 operons, while FlgM is an anti-sigma factor which binds to FliA and prevents its association with RNA polymerase core enzyme. In the present study, we isolated a number of fliA mutants in which the altered FliA proteins become insensitive to inhibition by FlgM. Sequence analysis of their mutation sites revealed that most of them caused the amino acid substitutions in region 4 of the conserved amino acid sequences of sigma factors which lies near the C-terminal end of FliA. Using a set of fliA deletion mutants in a high-expression plasmid, we demonstrated that polypeptides containing the C-terminal portion of FliA could titrate the intracellular FlgM protein resulting in derepression of the class 3 operons. This result indicates that the C-terminal region of FliA contains the FlgM-binding domain. This was confirmed by a chemical cross-linking experiment with FlgM and truncated FliA proteins.

Original languageEnglish
Pages (from-to)4568-4576
Number of pages9
JournalEMBO Journal
Issue number19
Publication statusPublished - 1994
Externally publishedYes



  • Alternative sigma factor
  • Anti-sigma factor
  • Flagellar regulon
  • Protein-protein interaction
  • Salmonella typhimurium

ASJC Scopus subject areas

  • Genetics
  • Cell Biology

Cite this