Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination

Minoru Murata, Fukashi Shibata, Akiko Hironaka, Kazunari Kashihara, Satoru Fujimoto, Etsuko Yokota, Kiyotaka Nagaki

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

A eukaryotic chromosome consists of a centromere, two telomeres and a number of replication origins, and 'artificial chromosomes' may be created in yeast and mammals when these three elements are artificially joined and introduced into cells. Plant artificial chromosomes (PACs) have been suggested as new vectors for the development of new crops and as tools for basic research on chromosomes. However, indisputable PAC formation has not yet been confirmed. Here, we present a method for generating PACs in the model plant Arabidopsis thaliana using the Cre/LoxP and Activator/Dissociation element systems. The successfully generated PAC, designated AtARC1 (A. thaliana artificial ring chromosome 1), originated from a centromeric edge of the long arm of chromosome 2, but its size (2.85 Mb) is much smaller than that of the original chromosome (26.3 Mb). Although AtARC1 contains only a short centromere domain consisting of 180 bp repeats approximately 250 kb in length, compared with the 3 Mb domain on the original chromosome 2, centromere-specific histone H3 (HTR12) was detected on the centromeric region. This result supported the observed stability of the PAC during mitosis in the absence of selection, and transmission of the PAC to the next generation through meiosis. Because AtARC1 contains a unique LoxP site driven by the CaMV 35S promoter, it is possible to introduce a selectable marker and desired transgenes into AtARC1 at the LoxP site using Cre recombinase. Therefore, AtARC1 meets the criteria for a PAC and is a promising vector.

Original languageEnglish
Pages (from-to)363-371
Number of pages9
JournalPlant Journal
Volume74
Issue number3
DOIs
Publication statusPublished - May 2013

Fingerprint

Artificial Chromosomes
Ring Chromosomes
Arabidopsis
Genetic Recombination
Plant Chromosomes
chromosomes
Centromere
Arabidopsis thaliana
Chromosomes, Human, Pair 2
centromeres
Chromosomes
Replication Origin
Telomere
Meiosis

Keywords

  • Arabidopsis thaliana
  • centromere
  • centromere-specific histone H3
  • plant artificial chromosome
  • ring mini-chromosome
  • stability
  • technical advance
  • transmission

ASJC Scopus subject areas

  • Plant Science
  • Cell Biology
  • Genetics

Cite this

Murata, M., Shibata, F., Hironaka, A., Kashihara, K., Fujimoto, S., Yokota, E., & Nagaki, K. (2013). Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination. Plant Journal, 74(3), 363-371. https://doi.org/10.1111/tpj.12128

Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination. / Murata, Minoru; Shibata, Fukashi; Hironaka, Akiko; Kashihara, Kazunari; Fujimoto, Satoru; Yokota, Etsuko; Nagaki, Kiyotaka.

In: Plant Journal, Vol. 74, No. 3, 05.2013, p. 363-371.

Research output: Contribution to journalArticle

Murata, M, Shibata, F, Hironaka, A, Kashihara, K, Fujimoto, S, Yokota, E & Nagaki, K 2013, 'Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination', Plant Journal, vol. 74, no. 3, pp. 363-371. https://doi.org/10.1111/tpj.12128
Murata M, Shibata F, Hironaka A, Kashihara K, Fujimoto S, Yokota E et al. Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination. Plant Journal. 2013 May;74(3):363-371. https://doi.org/10.1111/tpj.12128
Murata, Minoru ; Shibata, Fukashi ; Hironaka, Akiko ; Kashihara, Kazunari ; Fujimoto, Satoru ; Yokota, Etsuko ; Nagaki, Kiyotaka. / Generation of an artificial ring chromosome in Arabidopsis by Cre/LoxP-mediated recombination. In: Plant Journal. 2013 ; Vol. 74, No. 3. pp. 363-371.
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