Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation

Norihisa Yasui, Greg M. Findlay, Gerald D. Gish, Marilyn S. Hsiung, Jin Huang, Monika Tucholska, Lorne Taylor, Louis Smith, W. Clifford Boldridge, Akiko Koide, Tony Pawson, Shohei Koide

Research output: Contribution to journalArticle

22 Citations (Scopus)

Abstract

Cell signaling depends on dynamic protein-protein interaction (PPI) networks, often assembled through modular domains each interacting with multiple peptide motifs. This complexity raises a conceptual challenge, namely to define whether a particular cellular response requires assembly of the complete PPI network of interest or can be driven by a specific interaction. To address this issue, we designed variants of the Grb2 SH2 domain ("pY-clamps") whose specificity is highly biased toward a single phosphotyrosine (pY) motif among many potential pYXNX Grb2-binding sites. Surprisingly, directing Grb2 predominantly to a single pY site of the Ptpn11/Shp2 phosphatase, but not other sites tested, was sufficient for differentiation of the essential primitive endoderm lineage from embryonic stem cells. Our data suggest that discrete connections within complex PPI networks can underpin regulation of particular biological events. We propose that this directed wiring approach will be of general utility in functionally annotating specific PPIs.

Original languageEnglish
Pages (from-to)1034-1041
Number of pages8
JournalMolecular Cell
Volume54
Issue number6
DOIs
Publication statusPublished - Jun 19 2014
Externally publishedYes

Fingerprint

Protein Interaction Maps
Phosphotyrosine
Embryonic Stem Cells
Cell Differentiation
Endoderm
Proteins
src Homology Domains
Phosphoric Monoester Hydrolases
Binding Sites
Peptides

ASJC Scopus subject areas

  • Molecular Biology
  • Cell Biology

Cite this

Yasui, N., Findlay, G. M., Gish, G. D., Hsiung, M. S., Huang, J., Tucholska, M., ... Koide, S. (2014). Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. Molecular Cell, 54(6), 1034-1041. https://doi.org/10.1016/j.molcel.2014.05.002

Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. / Yasui, Norihisa; Findlay, Greg M.; Gish, Gerald D.; Hsiung, Marilyn S.; Huang, Jin; Tucholska, Monika; Taylor, Lorne; Smith, Louis; Boldridge, W. Clifford; Koide, Akiko; Pawson, Tony; Koide, Shohei.

In: Molecular Cell, Vol. 54, No. 6, 19.06.2014, p. 1034-1041.

Research output: Contribution to journalArticle

Yasui, N, Findlay, GM, Gish, GD, Hsiung, MS, Huang, J, Tucholska, M, Taylor, L, Smith, L, Boldridge, WC, Koide, A, Pawson, T & Koide, S 2014, 'Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation', Molecular Cell, vol. 54, no. 6, pp. 1034-1041. https://doi.org/10.1016/j.molcel.2014.05.002
Yasui, Norihisa ; Findlay, Greg M. ; Gish, Gerald D. ; Hsiung, Marilyn S. ; Huang, Jin ; Tucholska, Monika ; Taylor, Lorne ; Smith, Louis ; Boldridge, W. Clifford ; Koide, Akiko ; Pawson, Tony ; Koide, Shohei. / Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. In: Molecular Cell. 2014 ; Vol. 54, No. 6. pp. 1034-1041.
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