TY - JOUR
T1 - Cymbidium chlorotic mosaic virus, a new sobemovirus isolated from a spring orchid (Cymbidium goeringii) in Japan
AU - Kondo, Hideki
AU - Takemoto, Shogo
AU - Maruyama, Kazuyuki
AU - Chiba, Sotaro
AU - Ida Bagus, Andika
AU - Suzuki, Nobuhiro
N1 - Funding Information:
We thank K. Mitsuhata and Dr. T. Tanaka for their technical assistance, Drs. M. Tahara and N. Inouye for collecting plants, Drs. T. Kawano, S.T. Ohki, S. Yamashita and S. Toriyama for providing viruses and antisera, and Drs. T, Maeda, N. Inouye and T. Tamada for their helpful comments. This work was supported by the Ohara Foundation for Agricultural Research and Yomogi Inc.
Publisher Copyright:
© 2015, Springer-Verlag Wien.
PY - 2015/8/13
Y1 - 2015/8/13
N2 - Cymbidium chlorotic mosaic virus (CyCMV), isolated from a spring orchid (Cymbidium goeringii), was characterized molecularly. CyCMV isometric virions comprise a single, positive-strand RNA genome of 4,083 nucleotides and 30-kDa coat protein. The virus genome contains five overlapping open reading frames with a genomic organization similar to that of sobemoviruses. BLAST searches and phylogenetic analysis revealed that CyCMV is most closely related to papaya lethal yellowing virus, a proposed dicot-infecting sobemovirus (58.8 % nucleotide sequence identity), but has a relatively distant relationship to monocot-infecting sobemoviruses, with only modest sequence identities. This suggests that CyCMV is a new monocot-infecting member of the floating genus Sobemovirus.
AB - Cymbidium chlorotic mosaic virus (CyCMV), isolated from a spring orchid (Cymbidium goeringii), was characterized molecularly. CyCMV isometric virions comprise a single, positive-strand RNA genome of 4,083 nucleotides and 30-kDa coat protein. The virus genome contains five overlapping open reading frames with a genomic organization similar to that of sobemoviruses. BLAST searches and phylogenetic analysis revealed that CyCMV is most closely related to papaya lethal yellowing virus, a proposed dicot-infecting sobemovirus (58.8 % nucleotide sequence identity), but has a relatively distant relationship to monocot-infecting sobemoviruses, with only modest sequence identities. This suggests that CyCMV is a new monocot-infecting member of the floating genus Sobemovirus.
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U2 - 10.1007/s00705-015-2460-9
DO - 10.1007/s00705-015-2460-9
M3 - Article
C2 - 26025156
AN - SCOPUS:84938993296
VL - 160
SP - 2099
EP - 2104
JO - Archives of Virology
JF - Archives of Virology
SN - 0304-8608
IS - 8
ER -