TY - JOUR
T1 - Corrigendum to ‘A new tetra-segmented splipalmivirus with divided RdRP domains from Cryphonectria naterciae, a fungus found on chestnut and cork oak trees in Europe’ [Virus Research 307 (2022) 198606](S0168170221003130)(10.1016/j.virusres.2021.198606)
AU - Sato, Yukiyo
AU - Shahi, Sabitree
AU - Telengech, Paul
AU - Hisano, Sakae
AU - Cornejo, Carolina
AU - Rigling, Daniel
AU - Kondo, Hideki
AU - Suzuki, Nobuhiro
N1 - Publisher Copyright:
© 2022 Elsevier B.V.
PY - 2023/1/15
Y1 - 2023/1/15
N2 - The authors regret that although the original sequence data were correct, there were errors in the frame of CnSpV1 RNA3 ORF3-2 relative to ORF3-1 in Figs. 2 and S3, and associated text. Modified versions of the figures, legends and text are below. The authors would like to apologise for any inconvenience caused. Corrected text The second open reading frame, ORF3-2, relative to the first one ORF3-1 on Cryphonectria naterciae splipalmivirus 1 (CnSpV1) (GenBank: LC634421.1) should be situated “-1” not “-2” (Figs. 2 and Fig. S3). For RNA3 of Aspergillus fumigatus narnavirus 2 (AfuNV2) (GenBank: LC553686.1), the relative frame for ORF5 to ORF3 should be “-2” not “-1” (Fig. S3). Consistently, a hypothetical slippery sequence for -1 frameshifting [X_XXY_YYZ (Atkins et al., 2016)], C_CCA_AAT at nucleotide position 559-565, upstream of the stop codon of ORF3-1 on CnSpV1-RNA3 is observed (Fig. S3A). A prediction of RNA secondary structure by SPOT-RNA (Singh et al., 2019) suggests that this putative slippery and following sequence could form a pseudoknot-like structure (Fig. S3B). The -1 frameshift at this site could generate a fusion protein from ORF3-1 and ORF3-2 (Fig. S3C). This fusion protein product contains a putative ribosomal protein domain at the N-terminal part (Fig. S3C).
AB - The authors regret that although the original sequence data were correct, there were errors in the frame of CnSpV1 RNA3 ORF3-2 relative to ORF3-1 in Figs. 2 and S3, and associated text. Modified versions of the figures, legends and text are below. The authors would like to apologise for any inconvenience caused. Corrected text The second open reading frame, ORF3-2, relative to the first one ORF3-1 on Cryphonectria naterciae splipalmivirus 1 (CnSpV1) (GenBank: LC634421.1) should be situated “-1” not “-2” (Figs. 2 and Fig. S3). For RNA3 of Aspergillus fumigatus narnavirus 2 (AfuNV2) (GenBank: LC553686.1), the relative frame for ORF5 to ORF3 should be “-2” not “-1” (Fig. S3). Consistently, a hypothetical slippery sequence for -1 frameshifting [X_XXY_YYZ (Atkins et al., 2016)], C_CCA_AAT at nucleotide position 559-565, upstream of the stop codon of ORF3-1 on CnSpV1-RNA3 is observed (Fig. S3A). A prediction of RNA secondary structure by SPOT-RNA (Singh et al., 2019) suggests that this putative slippery and following sequence could form a pseudoknot-like structure (Fig. S3B). The -1 frameshift at this site could generate a fusion protein from ORF3-1 and ORF3-2 (Fig. S3C). This fusion protein product contains a putative ribosomal protein domain at the N-terminal part (Fig. S3C).
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U2 - 10.1016/j.virusres.2022.199013
DO - 10.1016/j.virusres.2022.199013
M3 - Comment/debate
C2 - 36584542
AN - SCOPUS:85145264683
SN - 0168-1702
VL - 324
JO - Virus Research
JF - Virus Research
M1 - 199013
ER -