TY - JOUR
T1 - Complete genome sequence of Habenaria mosaic virus, a new potyvirus infecting a terrestrial orchid (Habenaria radiata) in Japan
AU - Kondo, Hideki
AU - Maeda, Takanori
AU - Gara, I. Wayan
AU - Chiba, Sotaro
AU - Maruyama, Kazuyuki
AU - Tamada, Tetsuo
AU - Suzuki, Nobuhiro
N1 - Funding Information:
We are grateful to Kouji Mitsuhata for technical assistance. We thank Dr. Narinobu Inouye for helpful advice. This work was partially supported by a Grant-in-Aid for Scientific Research [KAKENHI] from the Japanese Ministry of Education, Culture, Sport, Science and Technology, and by Yomogi Inc.
PY - 2014/1
Y1 - 2014/1
N2 - The complete genomic sequence of Habenaria mosaic virus (HaMV), which infects terrestrial orchids (Habenaria radiata), has been determined. The genome is composed of 9,499 nucleotides excluding the 3′-terminal poly(A) tail, encoding a large polyprotein of 3,054 amino acids with the genomic features typical of a potyvirus. Putative proteolytic cleavage sites were identified by sequence comparison to those of known potyviruses. The HaMV polyprotein showed 58 % amino acid sequence identity to that encoded by the most closely related potyvirus, tobacco vein banding mosaic virus. Phylogenetic analysis of the polyprotein amino acid sequence and its coding sequences confirmed that HaMV formed a cluster with the chilli veinal mottle virus group, most of which infect solanaceous plants. These results suggest that HaMV is a distinct member of the genus Potyvirus.
AB - The complete genomic sequence of Habenaria mosaic virus (HaMV), which infects terrestrial orchids (Habenaria radiata), has been determined. The genome is composed of 9,499 nucleotides excluding the 3′-terminal poly(A) tail, encoding a large polyprotein of 3,054 amino acids with the genomic features typical of a potyvirus. Putative proteolytic cleavage sites were identified by sequence comparison to those of known potyviruses. The HaMV polyprotein showed 58 % amino acid sequence identity to that encoded by the most closely related potyvirus, tobacco vein banding mosaic virus. Phylogenetic analysis of the polyprotein amino acid sequence and its coding sequences confirmed that HaMV formed a cluster with the chilli veinal mottle virus group, most of which infect solanaceous plants. These results suggest that HaMV is a distinct member of the genus Potyvirus.
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U2 - 10.1007/s00705-013-1784-6
DO - 10.1007/s00705-013-1784-6
M3 - Article
C2 - 23857506
AN - SCOPUS:84893776060
VL - 159
SP - 163
EP - 166
JO - Archives of Virology
JF - Archives of Virology
SN - 0304-8608
IS - 1
ER -