Complete genome sequence data of nonpathogenic and nonantagonistic strain of rhizobium vitis var06-30 isolated from grapevine rhizosphere

Yoshiteru Noutoshi, Atsushi Toyoda, Tomoya Ishii, Kirara Saito, Megumi Watanabe, Akira Kawaguchi

Research output: Contribution to journalArticlepeer-review

Abstract

Rhizobium (Agrobacterium) is one genus in the family Rhizobiaceae. Most of the species are epi- or endophytic bacteria which include tumorigenic or rhizogenic pathogens, root nodule bacteria, and commensal endosymbionts. Rhizobium vitis strain VAR06-30 is a commensal bacterium without pathogenicity which was isolated from a rootstock of grapevine in Japan. It also does not have antagonistic activity to the pathogenic strain of R. vitis. Here, we show the complete genome sequence data with annotation of R. vitis VAR06-30 which was analyzed by sequence reads obtained from both PacBio and Illumina platforms. This genome sequence would contribute to the understanding of evolutionary lineage and characteristics of Rhizobium commensal bacteria.

Original languageEnglish
Pages (from-to)1283-1285
Number of pages3
JournalMolecular Plant-Microbe Interactions
Volume33
Issue number11
DOIs
Publication statusPublished - Nov 2020

Keywords

  • Commensalism
  • Crown gall disease
  • Endophytes
  • Grapevine
  • Rhizobium vitis
  • Rhizosphere

ASJC Scopus subject areas

  • Physiology
  • Agronomy and Crop Science

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