Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome: Complete Sequence and Contig Clones

Yasunari Ogihara, Kazuhiro Isono, Toshio Kojima, Akira Endo, Mitsumasa Hanaoka, Takashi Shiina, Toru Terachi, Shigeko Utsugi, Minoru Murata, Naoki Mori, Shigeo Takumi, Kazuho Ikeo, Takashi Gojobori, Rika Murai, Koji Murai, Yoshihiro Matsuoka, Yukari Ohnishi, Hikaru Tajiri, Koichiro Tsunewaki

Research output: Contribution to journalArticle

50 Citations (Scopus)

Abstract

Libraries of plasmid clones covering the entire chloroplast (cp) genome of the common wheat, Triticum aestivum cv. Chinese Spring were constructed and assembled into contig-clones. From these, we obtained the complete nucleotide sequence of wheat chloroplast DNA - a 134,540 bp circular DNA (DDBJ accession no. AB042240) containing four species of ribosomal RNA, 30 genes for 20 species of transfer RNA, and 71 protein coding genes. Additionally, we detected five unidentified open reading frames conserved among grasses. Plasmid clones are available on request.

Original languageEnglish
Pages (from-to)243-253
Number of pages11
JournalPlant Molecular Biology Reporter
Volume18
Issue number3
Publication statusPublished - 2000

Fingerprint

Chloroplast Genome
spring wheat
Triticum
Triticum aestivum
Clone Cells
Genes
Nucleic Acid Databases
clones
Open Reading Frames
plasmids
Plasmids
transfer RNA
wheat
Ribosomal RNA
Chloroplasts
Transfer RNA
Poaceae
rRNA Genes
open reading frames
genes

Keywords

  • Chinese Spring wheat
  • Chloroplast DNA
  • Clone bank
  • Complete nucleotide sequence
  • Plastome evolution

ASJC Scopus subject areas

  • Plant Science
  • Biochemistry, Genetics and Molecular Biology(all)
  • Biochemistry

Cite this

Ogihara, Y., Isono, K., Kojima, T., Endo, A., Hanaoka, M., Shiina, T., ... Tsunewaki, K. (2000). Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome: Complete Sequence and Contig Clones. Plant Molecular Biology Reporter, 18(3), 243-253.

Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome : Complete Sequence and Contig Clones. / Ogihara, Yasunari; Isono, Kazuhiro; Kojima, Toshio; Endo, Akira; Hanaoka, Mitsumasa; Shiina, Takashi; Terachi, Toru; Utsugi, Shigeko; Murata, Minoru; Mori, Naoki; Takumi, Shigeo; Ikeo, Kazuho; Gojobori, Takashi; Murai, Rika; Murai, Koji; Matsuoka, Yoshihiro; Ohnishi, Yukari; Tajiri, Hikaru; Tsunewaki, Koichiro.

In: Plant Molecular Biology Reporter, Vol. 18, No. 3, 2000, p. 243-253.

Research output: Contribution to journalArticle

Ogihara, Y, Isono, K, Kojima, T, Endo, A, Hanaoka, M, Shiina, T, Terachi, T, Utsugi, S, Murata, M, Mori, N, Takumi, S, Ikeo, K, Gojobori, T, Murai, R, Murai, K, Matsuoka, Y, Ohnishi, Y, Tajiri, H & Tsunewaki, K 2000, 'Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome: Complete Sequence and Contig Clones', Plant Molecular Biology Reporter, vol. 18, no. 3, pp. 243-253.
Ogihara Y, Isono K, Kojima T, Endo A, Hanaoka M, Shiina T et al. Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome: Complete Sequence and Contig Clones. Plant Molecular Biology Reporter. 2000;18(3):243-253.
Ogihara, Yasunari ; Isono, Kazuhiro ; Kojima, Toshio ; Endo, Akira ; Hanaoka, Mitsumasa ; Shiina, Takashi ; Terachi, Toru ; Utsugi, Shigeko ; Murata, Minoru ; Mori, Naoki ; Takumi, Shigeo ; Ikeo, Kazuho ; Gojobori, Takashi ; Murai, Rika ; Murai, Koji ; Matsuoka, Yoshihiro ; Ohnishi, Yukari ; Tajiri, Hikaru ; Tsunewaki, Koichiro. / Chinese Spring Wheat (Triticum aestivum L.) Chloroplast Genome : Complete Sequence and Contig Clones. In: Plant Molecular Biology Reporter. 2000 ; Vol. 18, No. 3. pp. 243-253.
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