Chemical Equilibrium Models for the S3 State of the Oxygen-Evolving Complex of Photosystem II

Hiroshi Isobe, Mitsuo Shoji, Jian-Ren Shen, Kizashi Yamaguchi

Research output: Contribution to journalArticle

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Abstract

We have performed hybrid density functional theory (DFT) calculations to investigate how chemical equilibria can be described in the S3 state of the oxygen-evolving complex in photosystem II. For a chosen 340-atom model, 1 stable and 11 metastable intermediates have been identified within the range of 13 kcal mol-1 that differ in protonation, charge, spin, and conformational states. The results imply that reversible interconversion of these intermediates gives rise to dynamic equilibria that involve processes with relocations of protons and electrons residing in the Mn4CaO5 cluster, as well as bound water ligands, with concomitant large changes in the cluster geometry. Such proton tautomerism and redox isomerism are responsible for reversible activation/deactivation processes of substrate oxygen species, through which Mn-O and O-O bonds are transiently ruptured and formed. These results may allow for a tentative interpretation of kinetic data on substrate water exchange on the order of seconds at room temperature, as measured by time-resolved mass spectrometry. The reliability of the hybrid DFT method for the multielectron redox reaction in such an intricate system is also addressed.

Original languageEnglish
Pages (from-to)502-511
Number of pages10
JournalInorganic Chemistry
Volume55
Issue number2
DOIs
Publication statusPublished - Jan 19 2016

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Photosystem II Protein Complex
Density functional theory
chemical equilibrium
Protons
Oxygen
density functional theory
relocation
Relocation
protons
Water
Redox reactions
Protonation
oxygen
Substrates
deactivation
water
Mass spectrometry
mass spectroscopy
Chemical activation
activation

ASJC Scopus subject areas

  • Inorganic Chemistry
  • Physical and Theoretical Chemistry

Cite this

Chemical Equilibrium Models for the S3 State of the Oxygen-Evolving Complex of Photosystem II. / Isobe, Hiroshi; Shoji, Mitsuo; Shen, Jian-Ren; Yamaguchi, Kizashi.

In: Inorganic Chemistry, Vol. 55, No. 2, 19.01.2016, p. 502-511.

Research output: Contribution to journalArticle

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