A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats

Takeki Uehara, Mitsuhiro Hirode, Atsushi Ono, Naoki Kiyosawa, Ko Omura, Toshinobu Shimizu, Yumiko Mizukawa, Toshikazu Miyagishima, Taku Nagao, Tetsuro Urushidani

Research output: Contribution to journalArticle

83 Citations (Scopus)

Abstract

For assessing carcinogenicity in animals, it is difficult and costly, an alternative strategy has been desired. We explored the possibility of applying a toxicogenomics approach by using comprehensive gene expression data in rat liver treated with various compounds. As prototypic non-genotoxic hepatocarcinogens, thioacetamide (TAA) and methapyrilene (MP) were selected and 349 commonly changed genes were extracted by statistical analysis. Taking both compounds as positive with six compounds, acetaminophen, aspirin, phenylbutazone, rifampicin, alpha-naphthylisothiocyanate, and amiodarone as negative, prediction analysis of microarray (PAM) was performed. By training and 10-fold cross validation, a classifier containing 112 probe sets that gave an overall success rate of 95% was obtained. The validity of the present discriminator was checked for 30 chemicals. The PAM score showed characteristic time-dependent increases by treatment with several non-genotoxic hepatocarcinogens, including TAA, MP, coumarin, ethionine and WY-14643, while almost all of the non-carcinogenic samples were correctly predicted. Measurement of hepatic glutathione content suggested that MP and TAA cause glutathione depletion followed by a protective increase, but the protective response is exhausted during repeated administration. Therefore, the presently obtained PAM classifier could predict potential non-genotoxic hepatocarcinogenesis within 24 h after single dose and the inevitable pseudo-positives could be eliminated by checking data of repeated administrations up to 28 days. Tests for carcinogenicity using rats takes at least 2 years, while the present work suggests the possibility of lowering the time to 28 days with high precision, at least for a category of non-genotoxic hepatocarcinogens causing oxidative stress.

Original languageEnglish
Pages (from-to)15-26
Number of pages12
JournalToxicology
Volume250
Issue number1
DOIs
Publication statusPublished - Aug 19 2008
Externally publishedYes

Fingerprint

Methapyrilene
Toxicogenetics
Thioacetamide
Microarray Analysis
Microarrays
Rats
Glutathione
1-Naphthylisothiocyanate
Classifiers
Carcinogenicity Tests
Ethionine
Phenylbutazone
Oxidative stress
Discriminators
Amiodarone
Liver
Rifampin
Acetaminophen
Gene expression
Aspirin

Keywords

  • Hepatocarcinogenesis
  • Liver
  • Non-genotoxic
  • Rat
  • Toxicogenomics

ASJC Scopus subject areas

  • Toxicology

Cite this

A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats. / Uehara, Takeki; Hirode, Mitsuhiro; Ono, Atsushi; Kiyosawa, Naoki; Omura, Ko; Shimizu, Toshinobu; Mizukawa, Yumiko; Miyagishima, Toshikazu; Nagao, Taku; Urushidani, Tetsuro.

In: Toxicology, Vol. 250, No. 1, 19.08.2008, p. 15-26.

Research output: Contribution to journalArticle

Uehara, T, Hirode, M, Ono, A, Kiyosawa, N, Omura, K, Shimizu, T, Mizukawa, Y, Miyagishima, T, Nagao, T & Urushidani, T 2008, 'A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats', Toxicology, vol. 250, no. 1, pp. 15-26. https://doi.org/10.1016/j.tox.2008.05.013
Uehara, Takeki ; Hirode, Mitsuhiro ; Ono, Atsushi ; Kiyosawa, Naoki ; Omura, Ko ; Shimizu, Toshinobu ; Mizukawa, Yumiko ; Miyagishima, Toshikazu ; Nagao, Taku ; Urushidani, Tetsuro. / A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats. In: Toxicology. 2008 ; Vol. 250, No. 1. pp. 15-26.
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