A follow-up study for biomass yield QTLs in rice

Kazuki Matsubara, Jun Ichi Yonemaru, Nobuya Kobayashi, Takuro Ishii, Eiji Yamamoto, Ritsuko Mizobuchi, Hiroshi Tsunematsu, Toshio Yamamoto, Hiroshi Kato, Masahiro Yano

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1 Citation (Scopus)

Abstract

The biomass yield (plant weight) of rice fluctuates from year to year. In a previous study, we demonstrated that six quantitative trait loci (QTLs) contribute to the variation in the plant weight of recombinant inbred lines (RILs) of high-yielding Japanese rice cultivars. However, it remains unclear whether the effects of those QTLs are stable over multiple years. Therefore, we evaluated the effect of the alleles on the plant weight of RILs over multiple years, including a change of fertilization level (i.e., in different environments). Even though the biomass yields of all RILs fluctuated among environments, RILs that were selected on the basis of the genotypes of the detected QTLs had a stable rank order of plant weight that corresponded to their genotypes. This multiple-environment experiment reveals the highly significant contribution of both genotypic and environmental variances to the observed variance in plant weight. A marginally significant QTL-environment interaction was detected at only one of the six QTLs, with a subtle contribution. These results support the idea that the biomass yield of rice can be improved through QTL-based allele selection.

Original languageEnglish
Article numbere0206054
JournalPLoS One
Volume13
Issue number10
DOIs
Publication statusPublished - Oct 1 2018
Externally publishedYes

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

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  • Cite this

    Matsubara, K., Yonemaru, J. I., Kobayashi, N., Ishii, T., Yamamoto, E., Mizobuchi, R., Tsunematsu, H., Yamamoto, T., Kato, H., & Yano, M. (2018). A follow-up study for biomass yield QTLs in rice. PLoS One, 13(10), [e0206054]. https://doi.org/10.1371/journal.pone.0206054