Institute of Plant Science and Resources

Research Output 1978 2020

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2018

Development of rice breeding and cultivation technology tailored for Kenya's environment

Makihara, D., Kimani, J., Samejima, H., Kikuta, M., Menge, D., Doi, K., Inukai, Y., Maekawa, M., Masunaga, T., Sasaki, Y., Katsura, K., Kitano, H., Mitsuya, S., Kano-Nakata, M., Wainaina, C., Gichuhi, E., Njinju, S., Kagito, S., Magoti, R., Kundu, C. & 1 others, Yamauchi, A., Aug 1 2018, Crop Production under Stressful Conditions: Application of Cutting-edge Science and Technology in Developing Countries. Springer Singapore, p. 27-47 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Kenya
Breeding
rice
breeding
Technology

Environmental toxicity and evaluation

Heng, L. Y., Ooi, L., Mori, I. C. & Futra, D., May 7 2018, Environmental Risk Analysis for Asian-Oriented, Risk-Based Watershed Management: Japan and Malaysia. Springer Singapore, p. 71-94 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Toxicity
toxicity
Biosensing Techniques
Biological Assay
Ecosystem
4 Citations (Scopus)

Transport system of mineral elements in rice

Mitani, N., Yamaji, N. & Ma, J. F., Mar 15 2018, Rice Genomics, Genetics and Breeding. Springer Singapore, p. 223-240 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Minerals
transporters
minerals
rice
Soil
2016

Chromatin immunoprecipitation for detecting epigenetic marks on plant nucleosomes

Nagaki, K., 2016, Methods in Molecular Biology. Humana Press Inc., Vol. 1469. p. 197-206 10 p. (Methods in Molecular Biology; vol. 1469).

Research output: Chapter in Book/Report/Conference proceedingChapter

Nucleosomes
Chromatin Immunoprecipitation
Epigenomics
Histones
Centromere
3 Citations (Scopus)

Genetic diversity of beet necrotic yellow vein virus

Tamada, T., Kondo, H. & Chiba, S., Jan 1 2016, Rhizomania. Springer International Publishing, p. 109-131 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Beet necrotic yellow vein virus
Benyvirus
Beta vulgaris
Veins
Viruses

Oligosaccharin receptors in plant immunity

Shinya, T., Desaki, Y. & Shibuya, N., Jan 1 2016, Research Progress in Oligosaccharins. Springer New York, p. 29-39 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Plant Immunity
Oligosaccharides
immunity
receptors
oligosaccharides

Regulation of stomatal responses to abiotic and biotic stresses by redox state

Murata, Y., Munemasa, S. & Mori, I., Jan 1 2016, Redox State as a Central Regulator of Plant-Cell Stress Responses. Springer International Publishing, p. 331-347 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

guard cells
biotic stress
abiotic stress
Oxidation-Reduction
stomatal movement
2015
4 Citations (Scopus)

Morphological variations of starch grains

Matsushima, R., Jan 1 2015, Starch: Metabolism and Structure. Springer Japan, p. 425-441 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

starch granules
Starch
Poaceae
phylogeny
starch
7 Citations (Scopus)

Physiology and biochemistry of aluminum toxicity and tolerance in crops

Aggarwal, A., Ezaki, B., Munjal, A. & Tripathi, B. N., Jan 1 2015, Stress Responses in Plants: Mechanisms of Toxicity and Tolerance. Springer International Publishing, p. 35-57 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Biochemistry
Physiology
Aluminum
biochemistry
Crops
14 Citations (Scopus)

The role of DNA methylation in transposable element silencing and genomic imprinting

Ikeda, Y. & Nishimura, T., Jan 1 2015, Nuclear Functions in Plant Transcription, Signaling and Development. Springer New York, p. 13-29 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomic Imprinting
DNA Transposable Elements
genomic imprinting
DNA methylation
DNA Methylation
2014
2 Citations (Scopus)

Beer and wort proteomics

Iimure, T., Kihara, M. & Sato, K., 2014, Methods in Molecular Biology. Humana Press Inc., Vol. 1072. p. 737-754 18 p. (Methods in Molecular Biology; vol. 1072).

Research output: Chapter in Book/Report/Conference proceedingChapter

Proteomics
Proteome
Proteins
Digestion
Mass Spectrometry
2 Citations (Scopus)

Genetic diversity and germplasm management: Wild barley, landraces, breeding materials

Sato, K., Flavell, A., Russell, J., Börner, A. & Valkoun, J., 2014, Biotechnology in Agriculture and Forestry. Springer International Publishing, Vol. 69. p. 21-36 16 p. (Biotechnology in Agriculture and Forestry; vol. 69).

Research output: Chapter in Book/Report/Conference proceedingChapter

germplasm
Hordeum
barley
landraces
Breeding
2 Citations (Scopus)

Plastid proteases

Adam, Z. & Sakamoto, W., Jan 1 2014, Plastid Biology. Springer New York, p. 359-389 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Plastids
plastids
Peptide Hydrolases
proteinases
Chloroplasts
4 Citations (Scopus)

Stomatal regulation of plant water status

Murata, Y. & Mori, I., Jan 28 2014, Plant Abiotic Stress, Second Edition. Wiley Blackwell, p. 47-67 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Water
stomata
water
Dehydration
transpiration
2013

A novel link between chloroplast development and stress response lessoned by leaf-variegated mutant

Sakamoto, W., Miura, E. & Kato, Y., Jan 1 2013, Advanced Topics in Science and Technology in China. Springer, p. 669-673 5 p. (Advanced Topics in Science and Technology in China).

Research output: Chapter in Book/Report/Conference proceedingChapter

Copper
Reactive Oxygen Species
Genes
Oxygen
Detoxification
2 Citations (Scopus)

Arabidopsis Centromeres

Murata, M. & Birchler, J. A., May 6 2013, Plant Centromere Biology. Wiley-Blackwell, p. 1-14 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Centromere
centromeres
Arabidopsis

Hypovirus Cysteine Proteases p29 and p48

Suzuki, N., 2013, Handbook of Proteolytic Enzymes. Elsevier Ltd, Vol. 2. p. 2192-2195 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cysteine Proteases
protease p29

The lattice-like structure observed by Vipp1-GFP in arabidopsis chloroplasts

Zhang, L., Kato, Y., Saigo, K., Vothknecht, U. C. & Sakamoto, W., Jan 1 2013, Advanced Topics in Science and Technology in China. Springer, p. 394-397 4 p. (Advanced Topics in Science and Technology in China).

Research output: Chapter in Book/Report/Conference proceedingChapter

Proteins
Bacteriophages
Staphylococcal Protein A
Bacterial Proteins
Algae
8 Citations (Scopus)

Transient gene expression in epidermal cells of plant leaves by biolistic DNA delivery

Ueki, S., Magori, S., Lacroix, B. & Citovsky, V., 2013, Methods in Molecular Biology. Vol. 940. p. 17-26 10 p. (Methods in Molecular Biology; vol. 940).

Research output: Chapter in Book/Report/Conference proceedingChapter

Biolistics
Plant Leaves
Gene Expression
DNA
Agrobacterium
2012

Cloning genes for mineral Uptake: Examples using rice mutants

Ma, J. F., Oct 24 2012, Plant Mutation Breeding and Biotechnology. CABI Publishing, p. 463-470 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cloning
Minerals
Organism Cloning
molecular cloning
Genes
2011
49 Citations (Scopus)

Beneficial Elements

Broadley, M., Brown, P., Cakmak, I., Ma, J. F., Rengel, Z. & Zhao, F., Aug 2011, Marschner's Mineral Nutrition of Higher Plants: Third Edition. Elsevier Inc., p. 249-269 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Citations (Scopus)

Genome Analysis: The State of Knowledge of Barley Genes

Druka, A., Sato, K. & Muehlbauer, G. J., Apr 20 2011, Barley: Production, Improvement, and Uses. Wiley-Blackwell, p. 85-111 27 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Hordeum
barley
Genome
genome
Genes
2010
33 Citations (Scopus)

Silicon transporters in higher plants

Ma, J. F., 2010, Advances in Experimental Medicine and Biology. Vol. 679. p. 99-109 11 p. (Advances in Experimental Medicine and Biology; vol. 679).

Research output: Chapter in Book/Report/Conference proceedingChapter

Silicon
Silicic Acid
Hordeum
Zea mays
Xylem
2008
20 Citations (Scopus)

Fungal Viruses

Ghabrial, S. A. & Suzuki, N., Jan 1 2008, Encyclopedia of Virology. Elsevier Ltd, p. 284-291 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome
Double-Stranded RNA
Host Specificity
RNA
Totiviridae
9 Citations (Scopus)

Homologous recombination-dependent gene targeting and an active DNA transposon nDart-promoted gene tagging for rice functional genomics

Johzuka-Hisatomi, Y., Maekawa, M., Takagi, K., Eun, C. H., Yamauchi, T., Shimatani, Z., Ahmed, N., Urawa, H., Tsugane, K., Terada, R. & Iida, S., 2008, Biotechnology in Agriculture and Forestry. Springer International Publishing, Vol. 62. p. 81-94 14 p. (Biotechnology in Agriculture and Forestry; vol. 62).

Research output: Chapter in Book/Report/Conference proceedingChapter

DNA Transposable Elements
Gene Targeting
Homologous Recombination
homologous recombination
tagging

Uptake of Silicon in Different Plant Species

Ma, J. F., Mar 20 2008, Handbook of Biomineralization: Biological Aspects and Structure Formation. Wiley-VCH Verlag GmbH & Co. KGaA, Vol. 1. p. 113-124 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Silicon
Genes
Xylem
Gene encoding
Cloning
2004
113 Citations (Scopus)

Viruses of the Chestnut Blight Fungus, Cryphonectria parasitica

Hillman, B. I. & Suzuki, N., 2004, Advances in Virus Research. Vol. 63. p. 423-472 50 p. (Advances in Virus Research; vol. 63).

Research output: Chapter in Book/Report/Conference proceedingChapter

Xylariales
Satellite RNAs
Molecular Evolution
Viral Genome
Viral RNA