Research Output

2016

A non-radioactive assay for selenophosphate synthetase activity using recombinant pyruvate pyrophosphate dikinase from thermus thermophilus HB8

Kamada, S., Okugochi, T., Asano, K., Tobe, R., Mihara, H., Nemoto, M., Inagaki, K. & Tamura, T., 2016, In : Bioscience, Biotechnology and Biochemistry. 80, 10, p. 1970-1972 3 p.

Research output: Contribution to journalArticle

A novel tag-free probe for targeting molecules interacting with a flavonoid catabolite

Nakashima, S., Liu, Z., Yamaguchi, Y., Saiki, S., Munemasa, S., Nakamura, T., Murata, Y. & Nakamura, Y., Sep 1 2016, In : Biochemistry and Biophysics Reports. 7, p. 240-245 6 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Apoptosis induction is involved in UVA-induced autolysis in sea cucumber Stichopus japonicus

Qi, H., Fu, H., Dong, X., Feng, D., Li, N., Wen, C., Nakamura, Y. & Zhu, B., May 1 2016, In : Journal of Photochemistry and Photobiology B: Biology. 158, p. 130-135 6 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Application of a microfluidic sperm sorter to in vitro production of dairy cattle sex-sorted embryos

Li, J., Zhu, S., He, X., Sun, R., He, Q., Gan, Y., Liu, S., Funahashi, H. & Li, Y., Apr 15 2016, In : Theriogenology. 85, 7, p. 1211-1218 8 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Calcium and EGTA Alleviate Cadmium Toxicity in Germinating Chickpea Seeds

Sakouhi, L., Rahoui, S., Ben Massoud, M., Munemasa, S., El Ferjani, E., Murata, Y. & Chaoui, A., May 31 2016, (Accepted/In press) In : Journal of Plant Growth Regulation. p. 1-10 10 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Changes in aboveground and belowground properties during secondary natural succession of a cool-temperate forest in Japan

Hyodo, F., Haraguchi, T. F., Hirobe, M. & Tateno, R., Jun 24 2016, (Accepted/In press) In : Journal of Forest Research. p. 1-8 8 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
4 Citations (Scopus)

Characterization of polymorphic microsatellite markers for a coniferous shrub J uniperus sabina (Cupressaceae)

Geng, Q., Qing, H., Ling, Z., Jeelani, N., Yang, J., Yoshikawa, K., Miki, N., Wang, Z. & Lian, C., 2016, (Accepted/In press) In : Plant Species Biology.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Citrus as a molecular contact point for co-evolution of Alternaria pathogens

Akimitsu, K., Ohtani, K., Shimagami, T., Katsumoto, M., Igarashi, C., Tanaka, S., Matsuoka, S., Mochizuki, S., Tsuge, T., Yamamoto, M., Kodama, M., Ichimura, K. & Gomi, K., Jul 1 2016, In : Physiological and Molecular Plant Pathology. 95, p. 93-96 4 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Complete genome sequence of Bifidobacterium kashiwanohense JCM 15439T, isolated from feces from a healthy Japanese infant

Morita, H., Toh, H., Nakano, A., Oshima, K., Takagi, M., Suda, W., Tanabe, S. & Hattori, M., 2016, In : Genome Announcements. 3, 2, e00255-15.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Complete genome sequence of Gardnerella vaginalis strain JCM 11026T, isolated from vaginal tracts of women

Oshima, K., Hisamatsu, S., Toh, H., Nakano, A., Kiuchi, M., Kuroyanagi, H., Morita, H. & Hattori, M., 2016, In : Genome Announcements. 3, 2, e00286-15.

Research output: Contribution to journalArticle

3 Citations (Scopus)
8 Citations (Scopus)

Costs and benefits of symbiosis between a bean beetle and Wolbachia

Okayama, K., Katsuki, M., Sumida, Y. & Okada, K., Sep 1 2016, In : Animal Behaviour. 119, p. 19-26 8 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Cryopreservation of ovaries from neonatal marmoset monkeys

Motohashi, H. H. & Ishibashi, H., 2016, In : Experimental Animals. 65, 3, p. 189-196 8 p.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Cutting stems before relaxing xylem tension induces artefacts in Vitis coignetiae, as evidenced by magnetic resonance imaging

Ogasa, M. Y., Utsumi, Y., Miki, N. H., Yazaki, K. & Fukuda, K., Feb 1 2016, In : Plant Cell and Environment. 39, 2, p. 329-337 9 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

Cypermethrin resistance and reproductive types in onion thrips, Thrips tabaci (Thysanoptera: Thripidae)

Aizawa, M., Watanabe, T., Kumano, A., Miyatake, T. & Sonoda, S., 2016, In : Journal of Pesticide Science. 41, 4, p. 167-170 4 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Derivation of induced trophoblast cell lines in cattle by doxycycline-inducible piggyBac vectors

Kawaguchi, T., Cho, D., Hayashi, M., Tsukiyama, T., Kimura, K., Matsuyama, S., Minami, N., Yamada, M. & Imai, H., Dec 2016, In : PloS one. 11, 12, e0167550.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Developmental characteristics of the seed bug Graptostethus servus (Hemiptera: Lygaeidae) at different temperatures

Suzaki, Y. & Okada, K., Nov 1 2016, In : Applied Entomology and Zoology. 51, 4, p. 555-560 6 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
17 Citations (Scopus)

Differences in physiological characteristics and gene expression levels in fruits between Japanese persimmon (Diospyros kaki thunb.) ‘Hiratanenashi’ and its small fruit mutant ‘Totsutanenashi’

Habu, T., Yamane, H., Naito, I., Nishiyama, S., Nonaka, A., Kawai, T., Yamada, H. & Tao, R., 2016, In : Horticulture Journal. 85, 4, p. 306-314 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Diversity of the intestinal microbiota differently affects non-neuronal and atropine-sensitive ileal contractile responses to short-chain fatty acids in mice

Yajima, M., Karaki, S. I., Tsuruta, T., Kimura, S., Nio-Kobayashi, J., Kuwahara, A. & Yajima, T., 2016, In : Biomedical Research (Japan). 37, 5, p. 319-328 10 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

DNA methylation errors in cloned mouse sperm by germ line barrier evasion

Koike, T., Wakai, T., Jincho, Y., Sakashita, A., Kobayashi, H., Mizutani, E., Wakayama, S., Miura, F., Ito, T. & Kono, T., Jun 1 2016, In : Biology of reproduction. 94, 6, 128.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Draft genome sequence of coccoid Lactobacillus equigenerosi NRIC 0697T isolated from the gastrointestinal tracts of healthy thoroughbreds

Toh, H., Nakano, A., Nguyen, C. T. K., Mimura, I., Arakawa, K., Tashiro, K., Kikusui, T. & Morita, H., 2016, In : Genome Announcements. 4, 1, e01679-15.

Research output: Contribution to journalArticle

Draft genome sequence of leuconostoc mesenteroides 213m0, isolated from traditional fermented mare milk airag in bulgan aimag,Mongolia

Morita, H., Toh, H., Oshima, K., Nakano, A., Hano, C., Yoshida, S., Bolormaa, T., Burenjargal, S., Nguyen, C. T. K., Tashiro, K., Arakawa, K. & Miyamotoa, T., 2016, In : Genome Announcements. 4, 2, e00178-16.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Draft genome sequence of leuconostoc mesenteroides 406 isolated from the traditional fermented mare milk airag in Tuv Aimag,Mongolia

Morita, H., Toh, H., Oshima, K., Nakano, A., Hano, C., Yoshida, S., Nguyen, T. T. T., Wulijideligen, Tashiro, K., Arakawa, K. & Miyamoto, T., 2016, In : Genome Announcements. 4, 2, e00166-16.

Research output: Contribution to journalArticle

Draft genome sequence of probiotic Lactobacillus acidophilus strain L-55 isolated from a healthy human gut

Fujii, Y., Toh, H., Matsubara, T., Tomida, S., Nguyen, C. T. K., Mimura, I., Nakamura, S. & Morita, H., 2016, In : Genome Announcements. 4, 6, e0135716.

Research output: Contribution to journalArticle

Draft genome sequence of Streptococcus orisasini SH06, isolated from a healthy thoroughbred gastrointestinal tract

Takagi, M., Nakano, A., Toh, H., Oshima, K., Arakawa, K., Nakajima, F., Tashiro, K., Kikusui, T., Yanagida, F. & Morita, H., Jan 1 2016, In : Genome Announcements. 4, 1, e01566-15.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Ecophysiological consequences of alcoholism on human gut microbiota: Implications for ethanol-related pathogenesis of colon cancer

Tsuruya, A., Kuwahara, A., Saito, Y., Yamaguchi, H., Tsubo, T., Suga, S., Inai, M., Aoki, Y., Takahashi, S., Tsutsumi, E., Suwa, Y., Morita, H., Kinoshita, K., Totsuka, Y., Suda, W., Oshima, K., Hattori, M., Mizukami, T., Yokoyama, A., Shimoyama, T. & 1 others, Nakayama, T., Jun 13 2016, In : Scientific Reports. 6, 27923.

Research output: Contribution to journalArticle

30 Citations (Scopus)
3 Citations (Scopus)

Effects of interrupted lighting on the spray formation of summer-toautumn-flowering small-flowered spray-type chrysanthemum cultivars 'Haruka' and 'Subaru'

Mori, Y., Sumitomo, K., Hisamatsu, T. & Goto, T., Dec 16 2016, In : Horticulture Journal. 85, 3, p. 264-271 8 p.

Research output: Contribution to journalArticle

Elevated Fibroblast Growth Factor Signaling Is Critical for the Pathogenesis of the Dwarfism in Evc2/Limbin Mutant Mice

Zhang, H., Kamiya, N., Tsuji, T., Takeda, H., Scott, G., Rajderkar, S., Ray, M. K., Mochida, Y., Allen, B., Lefebvre, V., Hung, I. H., Ornitz, D. M., Kunieda, T. & Mishina, Y., Dec 2016, In : PLoS genetics. 12, 12, e1006510.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Ellis Van Creveld2 is Required for Postnatal Craniofacial Bone Development

Badri, M. K., Zhang, H., Ohyama, Y., Venkitapathi, S., Kamiya, N., Takeda, H., Ray, M., Scott, G., Tsuji, T., Kunieda, T., Mishina, Y. & Mochida, Y., Aug 1 2016, In : Anatomical Record. 299, 8, p. 1110-1120 11 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Endothelin as a local regulating factor in the bovine oviduct

Yamamoto, Y., Kohka, M., Kobayashi, Y., Woclawek-Potocka, I. & Okuda, K., 2016, In : Reproduction, Fertility and Development. 28, 6, p. 673-681 9 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Epistasis effects of multiple ancestral-consensus amino acid substitutions on the thermal stability of glycerol kinase from Cellulomonas sp. NT3060

Fukuda, Y., Abe, A., Tamura, T., Kishimoto, T., Sogabe, A., Akanuma, S., Yokobori, S. I., Yamagishi, A., Imada, K. & Inagaki, K., May 1 2016, In : Journal of Bioscience and Bioengineering. 121, 5, p. 497-502 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Erratum to: Water transport properties of seven woody species from the semi-arid Mu Us Sandy Land, China

Murakami, Y., Miki, N., Yang, L., Zhang, G., Wang, L. H. & Yoshikawa, K., May 20 2016, (Accepted/In press) In : Landscape and Ecological Engineering. p. 1-2 2 p.

Research output: Contribution to journalArticle

Evidence for a PGF auto-amplification system in the endometrium in mares

Kozai, K., Tokuyama, S., Szóstek, A. Z., Toishi, Y., Tsunoda, N., Taya, K., Sakatani, M., Takahashi, M., Nambo, Y., Skarzynski, D. J., Yamamoto, Y., Kimura, K. & Okuda, K., May 1 2016, In : Reproduction. 151, 5, p. 517-526 10 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Evolution of pathogenicity controlled by small, dispensable chromosomes in Alternaria alternata pathogens

Tsuge, T., Harimoto, Y., Hanada, K., Akagi, Y., Kodama, M., Akimitsu, K. & Yamamoto, M., Jul 1 2016, In : Physiological and Molecular Plant Pathology. 95, p. 27-31 5 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)

Expression of Evc2 in craniofacial tissues and craniofacial bone defects in Evc2 knockout mouse

Badri, M. K., Zhang, H., Ohyama, Y., Venkitapathi, S., Alamoudi, A., Kamiya, N., Takeda, H., Ray, M., Scott, G., Tsuji, T., Kunieda, T., Mishina, Y. & Mochida, Y., Aug 1 2016, In : Archives of Oral Biology. 68, p. 142-152 11 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
17 Citations (Scopus)

Extension of shelf-life by limited duration of propylene and 1-MCP treatments in three kiwifruit cultivars

Asiche, W. O., Mworia, E. G., Oda, C., Mitalo, O. W., Owino, W. O., Ushijima, K., Nakano, R. & Kubo, Y., Jan 23 2016, In : Horticulture Journal. 85, 1, p. 76-85 10 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut

Kakihana, K., Fujioka, Y., Suda, W., Najima, Y., Kuwata, G., Sasajima, S., Mimura, I., Morita, H., Sugiyama, D., Nishikawa, H., Hattori, M., Hino, Y., Ikegawa, S., Yamamoto, K., Toya, T., Doki, N., Koizumi, K., Honda, K. & Ohashi, K., Oct 20 2016, In : Blood. 128, 16, p. 2083-2088 6 p.

Research output: Contribution to journalReview article

123 Citations (Scopus)

Fermentation and microbial population dynamics during the ensiling of native grass and subsequent exposure to air

Zhang, Q., Wu, B., Nishino, N., Wang, X. & Yu, Z., Mar 1 2016, In : Animal Science Journal. 87, 3, p. 389-397 9 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

FoxO1 regulates apoptosis induced by asbestos in the MT-2 human T-cell line

Matsuzaki, H., Lee, S., Maeda, M., Kumagai-Takei, N., Nishimura, Y. & Otsuki, T., Mar 31 2016, In : Journal of Immunotoxicology. 13, 5, p. 620-627 8 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Freezing xylem conduits with liquid nitrogen creates artifactual embolisms in water-stressed broadleaf trees

Umebayashi, T., Ogasa, M. Y., Miki, N., Utsumi, Y., Haishi, T. & Fukuda, K., Feb 1 2016, In : Trees - Structure and Function. 30, 1, p. 305-316 12 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)
3 Citations (Scopus)

Genome-wide view of genetic diversity reveals paths of selection and cultivar differentiation in peach domestication

Akagi, T., Hanada, T., Yaegaki, H., Gradziel, T. M. & Tao, R., Jun 15 2016, In : DNA Research. 23, 3, p. 271-282 12 p.

Research output: Contribution to journalArticle

Open Access
20 Citations (Scopus)

Genotype distribution and allele frequencies of the genes associated with body composition and locomotion traits in Myanmar native horses

Okuda, Y., Moe, H. H., Moe, K. K., Shimizu, Y., Nishioka, K., Shimogiri, T., Mannen, H., Kanemaki, M. & Kunieda, T., 2016, (Accepted/In press) In : Animal Science Journal.

Research output: Contribution to journalArticle

1 Citation (Scopus)

GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement

Nagatoshi, Y., Mitsuda, N., Hayashi, M., Inoue, S. I., Okuma, E., Kubo, A., Murata, Y., Seo, M., Saji, H., Kinoshita, T. & Ohme-Takagi, M., Apr 12 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 15, p. 4218-4223 6 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Good and bad protons: Genetic aspects of acidity stress responses in plants

Shavrukov, Y. & Hirai, Y., Jan 1 2016, In : Journal of Experimental Botany. 67, 1, p. 15-30 16 p.

Research output: Contribution to journalArticle

30 Citations (Scopus)

Histone deacetylases control module-specific phenotypic plasticity in beetle weapons

Ozawa, T., Mizuhara, T., Arata, M., Shimada, M., Niimi, T., Okada, K., Okada, Y. & Ohta, K., Dec 27 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 52, p. 15042-15047 6 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)